Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823272.1_cds_XP_016501423.1_15155
CDS Infomation

[gene=LOC107819784] [db_xref=GeneID:107819784] [protein=uncharacterized protein ycf45-like] [protein_id=XP_016501423.1] [location=complement(join(24063..24362,25102..25257,25849..26025,26184..26632,26746..26824,26976..27059,27534..27725,27836..27986,28279..28493,29126..29614))] [gbkey=CDS]
Sequence

ATGAGTGCTTTGAATACCCACTTTATCTTGATTGATCTTCAAAGCTCATGGTACTCAACT
AAGCAGATACCCAATTCCACCTTTTCTTATTTAAACCATTGTCAATTTGCTTCTTCGACG
TTCACAGCGGCATTTTGCCGAACACGTCGTGGGAGCAGTAAAATCTCGTCTTCTAGGTTG
CCGGTGCCGTCAATTCAGTCGCCGGAAATCAGGAGGCCAAAGGGATGTTCGATTTCCGGA
AATGGGTTGTCATTGGTTTCTTCAAATTCGACTTCCACTTCGAGTCCCATGATCTCGGAC
TTGGACTTGTTTTTGGAGATAGTGCCATTGAGAATGAGAAATGAGCTCTTTAGACATCAG
GAGATTGGGGAGTTGATTGAGGTGGTTATGGATTTGGGTAGAAAGCCCCTTGCCCGATTT
CCTTCAGGTGATTGGGTCATTTCGGAGCAGCCCGTAAAGCTTGAGGATCTAATCCACGCC
ATTTCAAAGGTGGGGGATTTCTCAGATGACAACCGTTCTGGTATTGACAGTTCCCTCCAT
CGTATTAGTGCAATTAGAAACCGTAAAATGCAAATCATTGGTCTTACCTGCCGGGTAGGT
CGAGCTGTATCTGGAAGCGCTGAGATCATACGTGACTTGGTTGAAGGAGGTGGCTCCATA
TTGGTGATCGGGCCTCCAGGGGTCGGTAAAACTACTTTAATCAGAGAAATAGCCAGAATG
CTGGCAGATGACCAGAAGAAACGAGTCGTTATTGTTGATACATCTAATGAGATCGGAGGT
GATGGAGATGTTCCTCATTCAGGTATTGGTTGTGCAAGAAGGATGCAAGTCCCAAATGTT
AACCTGCAGCATAATGTAATGATCGAAGCAGTTGAAAACCATATGCCCCAAACCATTATA
ATAGATGAAATAGGGACAGAGCTTGAAGCATTGGCTGCTAGTACAATTGCTCAGAGAGGA
GTACAGCTTGTTGGAACTGCCCATGGAAGTACTATTGAGAGTATAATAAAAAATCCATCC
TTACAAATGCTTGTTGGTGGCATAGAGAGTGTTACTCTCGGTGATGAGGAAGCAAGGAAA
AGGAAAGTACAGAAAACAATTCTGGAGAGGAAAGGTCCTCCAACTTTTACCTGTGCAGTT
GAGATGATATCAAGAACTGAATGTCGTGTTCACCATAGACTAGATTTAACAGTAGATGCA
ATATTAGCAGGAAAATCTCCTTTGTTTGAGATACGCAGATTGGAGATTGAAGCTGAAAAC
TCCATCGAGTCTTCTCTGTTCGCTCAAGAGGACCAAGTTAATGACTCTGAGCTAACTGAT
AAAGTGGAAAAGAAAGATAAAATAGAGTCCTTATCAAAAAAGAAAGATAAAATAGAGTCT
GAAAGAGAGTATGTAAAAAAGAAAGATAAAATAGAGTCTGAAAGAGAGTATGTAAAAAAG
AAAGATAAAGTAGAGTCTGATGGCGAGTATGTAAAAAAGAAAGATAAAGTAGAGTCTGAT
GGGGAGTATGTAAATTATCATCTGCAATCCAATAATGAAAACAATAAGGTAAAATTTGAG
TCAGATGAGGAAGATGAGGATCATCCCAATTCCAAGAAATTGGGCACCAATGGATCTATC
AGCAAAAGGAAATCTCTTGTGTATGTTTATACTTATAAGATTCAAGATGCTGATCTATTG
CAAGTTGCAACCGTTATGGGGCTTGAGGAAGAAATTGAAGTAACAGATGATATTGGCATT
GCGGATGCTATTCTAGCCTCTAGTGCTGAAATAAAGCAGAATCCTTGGATTCGTAGTGTT
GCCAAATTTCATCAAGTTCCTGTCTTTGTTGTAAAGTCAAGTACCATGGCACAAATGGTG
AAAGCTATCCGTATGATTCTTGGAATGGATTCCATTCACTCAAAACAGCCATTAACAAAT
GCATTCGATATTGAAATTGAAGACGATGCACCAAAAAGGAGACCAACATTGGAGGAGATA
GATGCCTTAGAGGAGGTTCGCCTTGCAATTGAGTACATCGTTATACCTGGTGGTGAGGCT
GTTGAACTTCTACCAAGGCGCTCTGAAATAGTTGCCCAACAACTCAAGCTGGTTGAAAGT
TATCAGCTGGCTGCAGAAAATTCAGGTACCGAATCAAACCCAAGGATTCAAATCCTTCCT
CAGAAACTACAGAGGAAGACTTCAGTAAAGCACTCCGGGTCCAGTTCAAGTCAGAACAGC
ACAGGTTCAAACTCTTGGATTGATAGGAACGGAGGCACTAGTGTTGCTCGCCTGCCATTC
TTGCCTGAATAA

Peptide Sequence

PEP ID

XP_016501423.1
PEP Infomation

PREDICTED: uncharacterized protein ycf45-like [Nicotiana tabacum]
Sequence

MSALNTHFILIDLQSSWYSTKQIPNSTFSYLNHCQFASSTFTAAFCRTRRGSSKISSSRL
PVPSIQSPEIRRPKGCSISGNGLSLVSSNSTSTSSPMISDLDLFLEIVPLRMRNELFRHQ
EIGELIEVVMDLGRKPLARFPSGDWVISEQPVKLEDLIHAISKVGDFSDDNRSGIDSSLH
RISAIRNRKMQIIGLTCRVGRAVSGSAEIIRDLVEGGGSILVIGPPGVGKTTLIREIARM
LADDQKKRVVIVDTSNEIGGDGDVPHSGIGCARRMQVPNVNLQHNVMIEAVENHMPQTII
IDEIGTELEALAASTIAQRGVQLVGTAHGSTIESIIKNPSLQMLVGGIESVTLGDEEARK
RKVQKTILERKGPPTFTCAVEMISRTECRVHHRLDLTVDAILAGKSPLFEIRRLEIEAEN
SIESSLFAQEDQVNDSELTDKVEKKDKIESLSKKKDKIESEREYVKKKDKIESEREYVKK
KDKVESDGEYVKKKDKVESDGEYVNYHLQSNNENNKVKFESDEEDEDHPNSKKLGTNGSI
SKRKSLVYVYTYKIQDADLLQVATVMGLEEEIEVTDDIGIADAILASSAEIKQNPWIRSV
AKFHQVPVFVVKSSTMAQMVKAIRMILGMDSIHSKQPLTNAFDIEIEDDAPKRRPTLEEI
DALEEVRLAIEYIVIPGGEAVELLPRRSEIVAQQLKLVESYQLAAENSGTESNPRIQILP
QKLQRKTSVKHSGSSSSQNSTGSNSWIDRNGGTSVARLPFLPE

Transcript Sequence

Gene sequence data has not been registered.